CDS

Accession Number TCMCG057C35307
gbkey CDS
Protein Id XP_018440739.1
Location complement(join(38947467..38947892,38947976..38948163,38948238..38948347,38948436..38948608))
Gene LOC108812857
GeneID 108812857
Organism Raphanus sativus

Protein

Length 298aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585237.1
Definition PREDICTED: zinc finger CCCH domain-containing protein 42 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Zinc finger CCCH domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13107        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070274        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATCCGTTGACACAGATAAAGTGGACACAGGCTATAAACGCCAAAGAAGCAGATCTAGGGATCTCCGAGGAGGCTTCGTGGCACGCCAGGTACAAAAACTCCGCCTATATCTACGCCGGAGGCTTAGCTTTCGACCTCACCGAGGGTGATCTCCTCGCCGTTTTCGCACAATATGGTGAAGTGGTTGATGTCAATCTTATCAGAGACAAGAGCACTGGAAAATCAAAGGGTTTTGCGTTTCTTGCTTATGAAGATCAACGAAGCACCATTCTCGCTGTTGATAATCTGAATGGAGCTCAGGTCTTGGGGAGGAAAATCAAGGTGGACCATTGTAGGGAATACAAGAAGCACGAAGAGGAAGATGAAGAGATGAGACAGCATAACAGGGAGGCACGTGGTGTATGCAGAGCTTTTCAGAGAGGAGAGTGTACCCGTGGTGATTCTTGCAAGTTTTCCCACGACGAGAAAAGAGCTGCAAATACTGGTTGGGGTCATGAAGAGGATAAAAGCGCCAAATGGGGTAACGACAAGTTTAATGGTGCCAAGAAGGGTGGTGGCCATCGAGGAGACTTCTTCAGACCTGATACGGAAGAGAAGACTTACAGAGAAGGAAAGGGTAATGGAGAAAGGGAGGAGCCAAGGTCGAGAGATTCTTATGATAGGAGGGAGCAAAAGAGATCAGGACGTCTTGATGATTCGCAATATAGAAGACATGATGCTGAAAATGATTATGCAAGGGAGGACAAGAGATCCAGAACACATGATAGCGATAAGTCCAAGGAAAGATCTAGAAGGGATTATAACGACAGGGAAGGAGAAGGTTCAAGCCGGCAATCAGACTCATCATCGAGGAAGGATAGTGATTATTCAAGCAGGGATGGTCGACGTCGCTAA
Protein:  
MNPLTQIKWTQAINAKEADLGISEEASWHARYKNSAYIYAGGLAFDLTEGDLLAVFAQYGEVVDVNLIRDKSTGKSKGFAFLAYEDQRSTILAVDNLNGAQVLGRKIKVDHCREYKKHEEEDEEMRQHNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDKSAKWGNDKFNGAKKGGGHRGDFFRPDTEEKTYREGKGNGEREEPRSRDSYDRREQKRSGRLDDSQYRRHDAENDYAREDKRSRTHDSDKSKERSRRDYNDREGEGSSRQSDSSSRKDSDYSSRDGRRR